STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L484_023284Uncharacterized protein. (133 aa)    
Predicted Functional Partners:
L484_008124
Charged multivesicular body protein 1.
   
 0.960
L484_005481
Vacuolar protein sorting-associated protein 32-2-like protein.
    
 0.952
L484_012595
Charged multivesicular body protein 5.
   
 0.944
L484_014959
Vacuolar protein sorting-associated protein 20-1-like protein.
   
 0.922
L484_017636
Vacuolar protein sorting-associated protein 24-1-like protein.
   
 0.916
L484_020626
Vacuolar protein sorting-associated protein 24-1-like protein.
   
 0.916
L484_018326
Vacuolar protein sorting-associated protein 4; Belongs to the AAA ATPase family.
    
 0.871
L484_022368
Vacuolar protein sorting-associated protein 4; Belongs to the AAA ATPase family.
    
 0.871
L484_022369
Subtilisin-like protease; Belongs to the peptidase S8 family.
    
 0.871
L484_013892
Charged multivesicular body protein 7.
    
 0.819
Your Current Organism:
Morus notabilis
NCBI taxonomy Id: 981085
Other names: M. notabilis, Morus notabilis C.K.Schneid.
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