STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L484_016042C2H2-type domain-containing protein. (419 aa)    
Predicted Functional Partners:
L484_026411
Uncharacterized protein.
    
 0.990
L484_016537
Nuclear pore protein.
    
 0.982
L484_008156
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.982
L484_003361
Nuclear pore complex protein.
    
 0.979
L484_012054
Nucleoporin seh1; Belongs to the WD repeat SEC13 family.
    
 0.979
L484_005468
Nup54 domain-containing protein.
    
 0.978
L484_027656
Nucleoporin GLE1.
    
 0.971
L484_001746
Uncharacterized protein.
   
 0.965
L484_006623
Uncharacterized protein.
   
 0.965
L484_010709
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.962
Your Current Organism:
Morus notabilis
NCBI taxonomy Id: 981085
Other names: M. notabilis, Morus notabilis C.K.Schneid.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.