STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L484_024408Zinc finger protein JACKDAW. (477 aa)    
Predicted Functional Partners:
L484_020137
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.885
L484_003662
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein.
    
 0.636
L484_005277
High mobility group B protein 10.
    
 0.599
L484_023658
Putative high mobility group B protein 11.
    
 0.599
L484_011653
High mobility group B protein 9.
    
 0.599
L484_021612
High mobility group B protein 15.
    
 0.599
L484_023563
Chromatin structure-remodeling complex subunit snf21.
    
 0.590
L484_023564
SWI/SNF chromatin-remodeling complex subunit snf22.
    
 0.590
L484_019751
Cleavage and polyadenylation specificity factor CPSF30.
    
  0.542
L484_017159
Serine/threonine-protein kinase ULK3; Belongs to the protein kinase superfamily.
   
 0.535
Your Current Organism:
Morus notabilis
NCBI taxonomy Id: 981085
Other names: M. notabilis, Morus notabilis C.K.Schneid.
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