STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L484_005624Homeobox domain-containing protein. (347 aa)    
Predicted Functional Partners:
L484_013944
Pentatricopeptide repeat-containing protein.
      
 0.627
L484_019370
Thioredoxin-like_fold domain-containing protein.
  
     0.529
L484_015850
Uncharacterized protein.
  
     0.522
L484_027255
Uncharacterized protein.
  
     0.497
L484_014580
Uncharacterized protein.
  
     0.488
L484_012376
Amine oxidase; Belongs to the copper/topaquinone oxidase family.
  
     0.487
L484_015006
DUF3506 domain-containing protein.
  
     0.486
L484_018067
Uncharacterized protein.
  
     0.481
L484_004366
Uncharacterized protein.
  
     0.481
L484_008432
Uncharacterized protein.
  
     0.472
Your Current Organism:
Morus notabilis
NCBI taxonomy Id: 981085
Other names: M. notabilis, Morus notabilis C.K.Schneid.
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