STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L484_009779LOB domain-containing protein. (239 aa)    
Predicted Functional Partners:
L484_023563
Chromatin structure-remodeling complex subunit snf21.
   
 0.685
L484_023564
SWI/SNF chromatin-remodeling complex subunit snf22.
   
 0.685
L484_003798
Uncharacterized protein.
  
 
  0.604
L484_017159
Serine/threonine-protein kinase ULK3; Belongs to the protein kinase superfamily.
    
 0.586
L484_010917
BHLH domain-containing protein.
  
 
  0.565
L484_023007
Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family.
  
 
   0.556
L484_009772
Transcriptional regulator SUPERMAN.
  
 
   0.546
L484_019755
Uncharacterized protein.
  
 
   0.540
L484_001320
Uncharacterized protein.
  
 
  0.528
L484_007864
Transcription factor PERIANTHIA.
  
 
   0.525
Your Current Organism:
Morus notabilis
NCBI taxonomy Id: 981085
Other names: M. notabilis, Morus notabilis C.K.Schneid.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.