STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEP13253.1Hopanoid biosynthesis associated radical SAM protein HpnJ. (486 aa)    
Predicted Functional Partners:
AEP13252.1
Hopanoid biosynthesis associated protein HpnK.
 
   
 0.910
AEP13249.1
Hopanoid biosynthesis associated glycosyl transferase protein HpnI.
     0.906
AEP13251.1
Integral membrane protein DUF6.
 
    0.886
AEP13593.1
Glycosyltransferase, probably involved in cell wall biogenesis.
     0.842
AEP13041.1
Squalene-hopene cyclase.
 
   
 0.779
AEP13255.1
Hopanoid biosynthesis associated radical SAM protein HpnH.
 
    0.761
AEP13614.1
Hopanoid-associated sugar epimerase.
  
     0.755
AEP12941.1
Uncharacterized protein conserved in bacteria.
 
   
 0.716
AEP13250.1
Integral membrane protein DUF6.
  
    0.651
AEP11012.1
Glycosyltransferase, probably involved in cell wall biogenesis.
 
     0.641
Your Current Organism:
Chloracidobacterium thermophilum
NCBI taxonomy Id: 981222
Other names: C. thermophilum B, Candidatus Chloracidobacterium thermophilum B, Chloracidobacterium thermophilum B, Chloracidobacterium thermophilum str. B, Chloracidobacterium thermophilum strain B
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