STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bceBBacitracin transport system permease protein; Functional classification: COG0577(V). (659 aa)    
Predicted Functional Partners:
bceA
Bacitracin transport system ATP-binding protein; Functional classification: COG1136(V).
 
 
 0.979
bceS
Two-component system, OmpR family, bacitracin resistance sensor histidine kinase; Functional classification: COG0642(T).
 
 
 
 0.921
bceR
Two-component system, OmpR family, bacitracin resistance response regulator; Functional classification: COG0745(T).
 
     0.886
SGPB_0952
Lantibiotic ABC transporter ATP-binding protein; Functional classification: COG1136(V).
 
 
 0.859
SGPB_1254
ABC transport system substrate-binding protein; Functional classification: COG0845(M); Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.735
vex2
ABC transport system ATP-binding protein; Functional classification: COG1136(V).
 
 
 0.623
SGPB_1673
Tn916 ORF13 protein; Functional classification: NOG08579.
  
 
 0.566
SGPB_0886
ABC transport system ATP-binding protein; Functional classification: COG1136(V).
  
 
 0.561
SGPB_0786
ABC transport system ATP-binding protein; Functional classification: COG1136(V).
  
 
 0.557
SGPB_1253
ABC transport system ATP-binding protein; Functional classification: COG1136(V).
  
 
 0.557
Your Current Organism:
Streptococcus pasteurianus
NCBI taxonomy Id: 981540
Other names: S. pasteurianus ATCC 43144, Streptococcus gallolyticus subsp. pasteurianus ATCC 43144, Streptococcus pasteurianus ATCC 43144, Streptococcus pasteurianus CCUG 46074, Streptococcus pasteurianus str. ATCC 43144, Streptococcus pasteurianus strain ATCC 43144
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