STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASCL4Achaete-scute family bHLH transcription factor 4. (173 aa)    
Predicted Functional Partners:
LOC100512766
Olfactory receptor.
      
 0.845
NEPRO
Nucleolus and neural progenitor protein.
      
 0.843
ARHGAP42
Rho GTPase activating protein 42.
      
 0.842
MAIP1
Matrix AAA peptidase interacting protein 1.
      
 0.842
OR2G2
Olfactory receptor.
      
 0.841
PRSS56
Serine protease 56; Belongs to the peptidase S1 family.
      
 0.779
ATP6V1E2
ATPase H+ transporting V1 subunit E2.
      
 0.777
STOX2
Storkhead box 2.
   
  
 0.774
TCF4
Transcription factor 4.
   
 
 0.696
MEIOC
Meiosis specific with coiled-coil domain.
      
 0.689
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
Server load: medium (74%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.