STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSPAN9Tetraspanin-9. (330 aa)    
Predicted Functional Partners:
TTC3
Tetratricopeptide repeat domain 3.
      
 0.738
KCNJ6
Potassium voltage-gated channel subfamily J member 6.
      
 0.669
TSPAN14
Tetraspanin.
    
 
0.663
PLPPR1
Phospholipid phosphatase related 1.
    
 
 0.663
TSPAN4
Tetraspanin.
  
   
0.656
TSPAN2
Tetraspanin.
      
0.656
TSPAN7
Tetraspanin.
      
0.655
TSPAN19
Tetraspanin.
      
0.654
TSPAN10
Tetraspanin.
      
0.654
VWCE
Von Willebrand factor C and EGF domains.
      
 0.645
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.