STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADAT1Adenosine deaminase tRNA specific 1. (550 aa)    
Predicted Functional Partners:
C1orf185
Chromosome 1 open reading frame 185.
      
 0.725
SPAG6
Uncharacterized protein.
      
 0.725
DNAH8
DHC_N1 domain-containing protein.
      
 0.689
ADAT2
Adenosine deaminase tRNA specific 2.
      
 0.673
PIWIL2
Piwi like RNA-mediated gene silencing 2; Belongs to the argonaute family.
      
 0.622
FRAS1
Fraser extracellular matrix complex subunit 1.
      
 0.611
PTPA
Serine/threonine-protein phosphatase 2A activator; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
   
  
 0.579
ZNF569
Zinc finger protein 569.
    
 
 0.574
TRUB1
TruB pseudouridine synthase family member 1.
   
  
 0.554
QPCTL
Glutaminyl-peptide cyclotransferase-like protein isoform 1.
   
  
 0.540
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.