STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPR180Integral membrane protein GPR180. (440 aa)    
Predicted Functional Partners:
TGDS
dTDP-D-glucose 4,6-dehydratase isoform X1.
   
  
 0.567
GPR50
G protein-coupled receptor 50; Belongs to the G-protein coupled receptor 1 family.
      
 0.507
GPRC5C
G protein-coupled receptor class C group 5 member C.
      
 0.489
GPR176
G-protein coupled receptor 176 isoform X1.
      
 0.469
GPR174
Putative G-protein coupled receptor 174.
      
 0.469
GPR135
Putative G-protein coupled receptor 135 isoform X1; Belongs to the G-protein coupled receptor 1 family.
      
 0.463
GPR27
G protein-coupled receptor 27.
      
 0.457
ELOVL3
Elongation of very long chain fatty acids protein 3; Catalyzes the first and rate-limiting reaction of the four reactions that constitute the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process allows the addition of 2 carbons to the chain of long- and very long-chain fatty acids (VLCFAs) per cycle. Condensing enzyme with higher activity toward C18 acyl-CoAs, especially C18:0 acyl-CoAs. May participate to the production of saturated and monounsaturated VLCFAs of different chain lengths that are involved in multiple biological processes as precurs [...]
      
 0.433
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.