STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC40Coiled-coil domain containing 40. (986 aa)    
Predicted Functional Partners:
CCDC39
Coiled-coil domain-containing protein 39.
    
 
 0.896
CCDC114
Coiled-coil domain-containing protein 114 isoform X2.
   
  
 0.894
RSPH9
Radial spoke head protein 9 homolog isoform 1.
   
  
 0.863
RSPH4A
Radial spoke head protein 4 homolog A isoform 1.
   
 
 0.855
DNAH11
Dynein axonemal heavy chain 11.
   
 
 0.839
DNAI2
Dynein intermediate chain 2, axonemal isoform X2.
      
 0.832
TTC29
Tetratricopeptide repeat protein 29 isoform 1.
   
 
 0.815
AK7
Adenylate kinase 7 isoform 1.
   
 
 0.806
DRC3
Dynein regulatory complex subunit 3.
   
 
 0.801
AKAP14
Uncharacterized protein.
   
    0.790
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.