Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BCAM | CYHR1 | ENSSSCP00000054885 | ENSSSCP00000058002 | Basal cell adhesion molecule (Lutheran blood group). | Cysteine and histidine rich 1. | 0.508 |
BCAM | LAMA3 | ENSSSCP00000054885 | ENSSSCP00000004016 | Basal cell adhesion molecule (Lutheran blood group). | Laminin subunit alpha 3. | 0.421 |
BCAM | NAT14 | ENSSSCP00000054885 | ENSSSCP00000054458 | Basal cell adhesion molecule (Lutheran blood group). | N-acetyltransferase 14 (putative). | 0.432 |
BCAM | NECTIN2 | ENSSSCP00000054885 | ENSSSCP00000060380 | Basal cell adhesion molecule (Lutheran blood group). | Uncharacterized protein. | 0.507 |
BCAM | SERPINB1 | ENSSSCP00000054885 | ENSSSCP00000001081 | Basal cell adhesion molecule (Lutheran blood group). | Leukocyte elastase inhibitor; Neutrophil serine protease inhibitor that plays an essential role in the regulation of the innate immune response, inflammation and cellular homeostasis. Acts primarily to protect the cell from proteases released in the cytoplasm during stress or infection. These proteases are important in killing microbes but when released from granules, these potent enzymes also destroy host proteins and contribute to mortality. Regulates the activity of the neutrophil proteases elastase, cathepsin G, proteinase-3, chymase, chymotrypsin, and kallikrein-3. Acts also as a [...] | 0.430 |
BCAM | ZC3H3 | ENSSSCP00000054885 | ENSSSCP00000028102 | Basal cell adhesion molecule (Lutheran blood group). | Zinc finger CCCH-type containing 3. | 0.497 |
CYHR1 | BCAM | ENSSSCP00000058002 | ENSSSCP00000054885 | Cysteine and histidine rich 1. | Basal cell adhesion molecule (Lutheran blood group). | 0.508 |
CYHR1 | ZC3H3 | ENSSSCP00000058002 | ENSSSCP00000028102 | Cysteine and histidine rich 1. | Zinc finger CCCH-type containing 3. | 0.788 |
LAMA3 | BCAM | ENSSSCP00000004016 | ENSSSCP00000054885 | Laminin subunit alpha 3. | Basal cell adhesion molecule (Lutheran blood group). | 0.421 |
NAT14 | BCAM | ENSSSCP00000054458 | ENSSSCP00000054885 | N-acetyltransferase 14 (putative). | Basal cell adhesion molecule (Lutheran blood group). | 0.432 |
NECTIN2 | BCAM | ENSSSCP00000060380 | ENSSSCP00000054885 | Uncharacterized protein. | Basal cell adhesion molecule (Lutheran blood group). | 0.507 |
SERPINB1 | BCAM | ENSSSCP00000001081 | ENSSSCP00000054885 | Leukocyte elastase inhibitor; Neutrophil serine protease inhibitor that plays an essential role in the regulation of the innate immune response, inflammation and cellular homeostasis. Acts primarily to protect the cell from proteases released in the cytoplasm during stress or infection. These proteases are important in killing microbes but when released from granules, these potent enzymes also destroy host proteins and contribute to mortality. Regulates the activity of the neutrophil proteases elastase, cathepsin G, proteinase-3, chymase, chymotrypsin, and kallikrein-3. Acts also as a [...] | Basal cell adhesion molecule (Lutheran blood group). | 0.430 |
ZC3H3 | BCAM | ENSSSCP00000028102 | ENSSSCP00000054885 | Zinc finger CCCH-type containing 3. | Basal cell adhesion molecule (Lutheran blood group). | 0.497 |
ZC3H3 | CYHR1 | ENSSSCP00000028102 | ENSSSCP00000058002 | Zinc finger CCCH-type containing 3. | Cysteine and histidine rich 1. | 0.788 |