STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100624086Histone H2A type 2-A-like. (130 aa)    
Predicted Functional Partners:
HIST1H2BD
Histone H2B; Belongs to the histone H2B family.
 
 
 0.752
SMARCB1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.
    
 
 0.652
LOC100152878
Histone H2B; Belongs to the histone H2B family.
 
 
 0.622
LOC100152135
Histone H2B; Belongs to the histone H2B family.
 
 
 0.621
H2BC21
Histone H2B; Belongs to the histone H2B family.
 
 
 0.621
H2BU1
Histone H2B; Belongs to the histone H2B family.
 
 
 0.620
H2BC11
Histone H2B; Belongs to the histone H2B family.
 
 
 0.616
H2BE1
Histone H2B; Belongs to the histone H2B family.
 
 
 0.608
I3LAJ9_PIG
Histone H2B; Belongs to the histone H2B family.
 
 
 0.597
LOC100155267
Histone domain-containing protein; Belongs to the histone H2B family.
 
 
 0.581
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.