STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB28RAB28, member RAS oncogene family. (252 aa)    
Predicted Functional Partners:
DENND5A
DENN domain containing 5A.
      
 0.778
DENND1C
DENN domain containing 1C.
      
 0.745
DENND5B
DENN domain containing 5B.
      
 0.701
TGFBRAP1
Transforming growth factor beta receptor associated protein 1.
    
 
 0.677
DENND3
DENN domain containing 3.
    
 
 0.673
ZNF653
Zinc finger protein 653.
    
 
 0.671
DENND1A
DENN domain-containing protein 1A isoform 3.
   
  
 0.670
ZNF692
Zinc finger protein 692.
    
 
 0.660
C8orf37
Chromosome 8 open reading frame 37.
      
 0.647
CIT
Citron Rho-interacting kinase; Plays a role in cytokinesis. Displays serine/threonine protein kinase activity; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
   
 
 0.623
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.