STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110258087alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (646 aa)    
Predicted Functional Partners:
RPN1
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation (Probable). N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation ac [...]
   
  
 0.526
MAN2B1
Alpha-mannosidase.
   
  
 0.505
DNAJC10
DnaJ heat shock protein family (Hsp40) member C10.
   
  
 0.501
PWWP3B
PWWP domain-containing protein MUM1L1 isoform X1.
      
 0.501
MOGS
Mannosyl-oligosaccharide glucosidase isoform 1.
   
  
 0.487
DNAJB12
DnaJ heat shock protein family (Hsp40) member B12.
   
  
 0.480
UGGT2
UDP-glucose glycoprotein glucosyltransferase 2.
      
 0.479
CCDC47
Coiled-coil domain-containing protein 47.
      
 0.474
SASH3
SAM and SH3 domain containing 3.
   
  
 0.472
ALG12
Mannosyltransferase.
   
  
 0.411
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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