STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIREAutoimmune regulator. (559 aa)    
Predicted Functional Partners:
FOXN1
Forkhead box N1.
   
 
 0.767
CD80
CD80 molecule.
      
 0.650
FEZF2
FEZ family zinc finger 2.
   
 
 0.640
ZNF341
Zinc finger protein 341.
   
 
 0.609
RBBP4
WD_REPEATS_REGION domain-containing protein.
   
 
 0.592
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 
 0.592
GATAD2B
GATA zinc finger domain containing 2B.
   
 
 0.548
GATAD2A
GATA zinc finger domain containing 2A.
   
 
 0.548
FOXP3
Forkhead box protein P3 isoform a.
    
 
 0.545
NOP10
NOP10 ribonucleoprotein.
      
 0.544
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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