STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PER3PAS domain-containing protein. (376 aa)    
Predicted Functional Partners:
CSNK1D
Casein kinase 1 delta.
    
 0.970
LOC100523244
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.959
CRY2
Cryptochrome circadian regulator 2.
   
 
 0.936
FBXW11
F-box and WD repeat domain containing 11.
    
 0.933
PER2
Period circadian regulator 2.
  
  
0.932
CRY1
Cryptochrome circadian regulator 1.
   
 
 0.910
RBX1
E3 ubiquitin-protein ligase RBX1.
     
 0.907
PER1
Period circadian regulator 1.
  
  
0.902
CUL1
Cullin 1; Belongs to the cullin family.
     
 0.902
SKP1
S-phase kinase associated protein 1; Belongs to the SKP1 family.
     
 0.900
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.