STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FOXG1Forkhead box G1. (486 aa)    
Predicted Functional Partners:
PAX6
Paired box 6.
   
 
 0.893
TBR1
T-box brain transcription factor 1.
   
  
 0.863
SATB2
DNA-binding protein SATB.
    
 
 0.770
NES
Nestin; Belongs to the intermediate filament family.
    
 
 0.760
OTX2
Orthodenticle homeobox 2.
   
  
 0.759
EMX2
Empty spiracles homeobox 2.
   
 
 0.755
EMX1
Empty spiracles homeobox 1.
   
 
 0.713
DLX5
Homeobox protein DLX-5.
   
 
 0.712
LHX2
LIM/homeobox protein Lhx2.
   
 
 0.701
NEUROD1
Neurogenic differentiation factor.
   
  
 0.671
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.