STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEMA3BSemaphorin 3B; Belongs to the semaphorin family. (747 aa)    
Predicted Functional Partners:
NRP1
Neuropilin; Belongs to the neuropilin family.
    
 0.981
PLXNA3
Plexin A3.
    
 
 0.826
RPP40
Ribonuclease P/MRP subunit p40.
      
 0.775
PLXNA1
Plexin A1.
    
 
0.775
LZTS3
Leucine zipper tumor suppressor family member 3.
      
 0.763
PLXND1
Plexin D1.
    
 
 0.731
KCNMB1
Potassium calcium-activated channel subfamily M regulatory beta subunit 1.
   
  
 0.706
UVRAG
UV radiation resistance associated.
      
 0.695
NRP2
Neuropilin; Belongs to the neuropilin family.
    
 
 0.671
SYNGAP1
Synaptic Ras GTPase activating protein 1.
   
  
 0.663
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.