STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMC2COX assembly mitochondrial protein. (90 aa)    
Predicted Functional Partners:
ZNF394
Zinc finger protein 394 isoform 1.
      
 0.798
DLGAP5
DLG associated protein 5.
      
 0.742
NEK4
NIMA related kinase 4.
      
 0.529
SNRPG
Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing.
   
  
 0.527
ZCCHC14
Zinc finger CCHC domain-containing protein 14.
    
 
 0.522
RALGPS1
Ral GEF with PH domain and SH3 binding motif 1.
      
 0.517
ZNF395
Zinc finger protein 395.
      
 0.515
SPNS3
Sphingolipid transporter 3 (putative).
      
 0.515
KIAA1324
KIAA1324.
      
 0.514
COX19
Cytochrome c oxidase assembly factor COX19.
      
 0.504
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.