STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD17Ankyrin repeat domain 17. (2499 aa)    
Predicted Functional Partners:
SNX10
Sorting nexin-10 isoform 1.
    
 
 0.628
TMEM178B
Transmembrane protein 178B.
      
 0.611
SNCAIP
Uncharacterized protein.
    
 
 0.610
IGF2BP3
Insulin-like growth factor 2 mRNA-binding protein 3.
      
 0.586
HUWE1
HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1.
   
 
 0.563
CDYL
Chromodomain Y like.
    
 
 0.560
GTF2H1
General transcription factor IIH subunit 1.
    
 
 0.514
MRPS31
Mitochondrial ribosomal protein S31.
      
 0.510
MAP3K2
Mitogen-activated protein kinase kinase kinase 2.
   
 
 0.505
NCAPH2
Uncharacterized protein.
      
 0.497
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.