STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRIX1Uncharacterized protein. (404 aa)    
Predicted Functional Partners:
RAI14
ANK_REP_REGION domain-containing protein.
 
    
 0.569
EIPR1
EARP complex and GARP complex interacting protein 1.
      
 0.514
DTWD2
DTW domain-containing protein 2 isoform a.
      
 0.514
SLF2
SMC5-SMC6 complex localization factor 2.
      
 0.506
VEZT
Vezatin, adherens junctions transmembrane protein.
      
 0.503
CFAP206
Cilia-and flagella-associated protein 206.
      
 0.502
DNAJC21
Uncharacterized protein.
      
 0.502
IQCE
IQ motif containing E.
    
 
 0.488
AGXT2
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
      
 0.463
GRAMD1B
GRAM domain containing 1B.
      
 0.463
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.