STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_06119Aminotransferase class I and II domain-containing protein. (165 aa)    
Predicted Functional Partners:
AG1IA_01206
Aspartate aminotransferase.
   
0.957
AG1IA_08450
Malate dehydrogenase.
   
 0.954
AG1IA_01281
Malate dehydrogenase.
   
 0.954
AG1IA_07649
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 0.918
AG1IA_05249
Uncharacterized protein.
    
 
 0.914
AG1IA_04187
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
   
 0.910
AG1IA_03081
Transaminase.
   
 0.908
AG1IA_07766
NAD-specific glutamate dehydrogenase.
   
 0.898
AG1IA_04964
C3H1-type domain-containing protein.
   
 0.898
AG1IA_00181
Nsp1_C domain-containing protein.
    
   0.882
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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