STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_04507Actin-associated protein. (951 aa)    
Predicted Functional Partners:
AG1IA_03257
Hob3p.
    
 
 0.956
AG1IA_02481
SH3 domain-containing protein.
    
 
0.954
AG1IA_02403
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 
 0.841
AG1IA_05726
Myosin-1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.828
AG1IA_09419
Glycoside hydrolase family 28 protein.
    
 
 0.818
AG1IA_03917
SH3 domain-containing protein.
    
 0.802
AG1IA_04576
SH3 domain-containing protein.
   
 0.786
AG1IA_01341
E3 ubiquitin-protein ligase.
    
 
 0.756
AG1IA_07757
GTPase-activating protein.
    
 
 0.739
AG1IA_01964
Vacuolar sorting protein 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 0.735
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.