STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_06209Histidine kinase-, DNA gyrase b-, and HSP90-like ATPase domain-containing protein. (262 aa)    
Predicted Functional Partners:
AG1IA_06206
Histidine kinase.
 
     0.935
AG1IA_06207
Response regulator receiver domain-containing protein.
 
     0.912
AG1IA_08727
Response regulator receiver domain-containing protein.
 
     0.846
AG1IA_08728
Histidine kinase.
 
      0.843
AG1IA_08721
Response regulator receiver domain-containing protein.
 
     0.793
AG1IA_09460
Pyruvate dehydrogenase protein X component.
    
 0.724
AG1IA_09118
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
    
 0.724
AG1IA_04208
2-oxoacid dehydrogenases acyltransferase domain-containing protein.
    
 0.724
AG1IA_01959
Pyruvate dehydrogenase X component.
    
 0.724
AG1IA_02061
Pyruvate dehydrogenase.
    
 0.719
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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