STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_04223Aminomethyl transferase. (412 aa)    
Predicted Functional Partners:
AG1IA_03530
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.833
AG1IA_02876
Dihydrofolate reductase domain-containing protein; Belongs to the dihydrofolate reductase family.
   
 
 0.798
AG1IA_05574
Aminomethyltransferase.
     
 0.787
AG1IA_00286
Methylenetetrahydrofolate dehydrogenase.
     
 0.758
AG1IA_04485
Iron-sulfur cluster biosynthesis domain-containing protein.
  
 
 0.756
AG1IA_00708
DASH complex subunit dad4 domain-containing protein.
     
 0.721
AG1IA_00931
DAO domain-containing protein.
     
 0.721
AG1IA_10374
Glycine dehydrogenase.
     
 0.690
AG1IA_08039
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
     
 0.690
AG1IA_09154
Phosphopantothenoylcysteine decarboxylase.
    
  0.669
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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