STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_02747Cyclin domain-containing protein. (297 aa)    
Predicted Functional Partners:
AG1IA_04149
Cyclin-dependent protein kinase inhibitor.
    
 0.966
AG1IA_08217
20S proteasome subunit.
 
      0.808
AG1IA_09177
ATP dependent DNA ligase domain-containing protein.
    
 0.783
AG1IA_07091
DNA ligase.
    
 0.726
AG1IA_08169
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.716
AG1IA_08142
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.716
AG1IA_01860
Cdc2 cyclin-dependent kinase.
    
 0.714
AG1IA_01087
CMGC/CDK/CDK5 protein kinase.
    
 0.714
AG1IA_09752
Uncharacterized protein.
    
 0.675
AG1IA_00581
DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.
     
 0.554
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.