STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_02578Exosome complex exonuclease rrp4. (332 aa)    
Predicted Functional Partners:
AG1IA_09461
Exoribonuclease.
   
 0.999
AG1IA_07820
Exosome complex exonuclease RRP40.
   
 0.999
AG1IA_06319
Exosome component 4.
   
 0.999
AG1IA_06200
Exosome complex exonuclease rrp45.
   
 0.999
AG1IA_01048
3' exoribonuclease family domain-containing protein.
   
 0.999
AG1IA_02186
3' exoribonuclease family domain-containing protein.
   
 0.999
AG1IA_00631
Opa-interacting protein OIP2.
   
 0.999
AG1IA_00795
mRNA transport regulator 3.
   
 0.998
AG1IA_06889
Uncharacterized protein.
   
 0.996
AG1IA_03602
ATP-dependent RNA helicase DOB1.
   
 0.992
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.