STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_01876FUSC domain-containing protein. (940 aa)    
Predicted Functional Partners:
AG1IA_00506
Histone acetyltransferase SAGA, TRRAP/TRA1 component, PI-3 kinase superfamily TRA1; Belongs to the PI3/PI4-kinase family.
   
 
 0.712
AG1IA_07598
Spt3.
    
 
 0.687
AG1IA_02183
Ada3 domain-containing protein.
    
 
 0.681
AG1IA_00514
TFIID-31kDa domain-containing protein.
   
 
 0.674
AG1IA_01567
DUF1325 domain-containing protein.
    
 
 0.666
AG1IA_02354
Transcription initiation factor TFIID 23-30kDa subunit domain-containing protein.
    
 
 0.654
AG1IA_07698
Transcription initiation factor TFIID complex 60 kDa subunit.
    
 
 0.636
AG1IA_08287
SWIRM domain-containing protein.
    
 
 0.630
TRM8
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
    
 
 0.616
AG1IA_05904
Ubiquitinyl hydrolase 1.
    
   0.611
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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