STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_00625Homoserine O-acetyltransferase. (534 aa)    
Predicted Functional Partners:
AG1IA_01014
Tryptophan synthase.
  
 
 0.868
AG1IA_04149
Cyclin-dependent protein kinase inhibitor.
  
 0.829
AG1IA_05484
Maf domain-containing protein.
   
 
 0.812
AG1IA_00745
Deoxyribose-phosphate aldolase.
  
 0.794
AG1IA_01398
TPR_1 domain-containing protein.
   
 0.784
AG1IA_00227
Calcium:hydrogen antiporter; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
  
 0.776
AG1IA_04807
Aminotransferase class-III domain-containing protein.
  
 0.759
AG1IA_03043
Acetyl-coenzyme A synthetase.
  
 0.734
AG1IA_03397
Fumarate reductase.
  
 0.726
AG1IA_06523
Hydrolase domain-containing protein.
  
 0.724
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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