STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AG1IA_00180Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A. (668 aa)    
Predicted Functional Partners:
AG1IA_04598
AP-1 complex subunit beta-1; Belongs to the glycosyl hydrolase 18 family.
    
  0.553
AG1IA_01095
AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
    
  0.553
AG1IA_04539
AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
    
  0.542
AG1IA_01286
Ribosomal l18e/L15 domain-containing protein.
   
   0.465
AG1IA_02801
Ribosomal l19 domain-containing protein.
    
   0.463
AG1IA_02675
Ribosomal l14p/L23e domain-containing protein; Belongs to the universal ribosomal protein uL14 family.
    
 
 0.461
AG1IA_01360
Ribosomal protein subunit S2.
    
   0.461
AG1IA_00710
Uncharacterized protein.
    
   0.461
AG1IA_10184
Ribosomal l28 family domain-containing protein.
    
   0.459
AG1IA_09786
Ribosomal l30p/L7e domain-containing protein.
    
   0.459
Your Current Organism:
Rhizoctonia solani AG1IA
NCBI taxonomy Id: 983506
Other names: R. solani AG-1 IA, Rhizoctonia solani AG-1 IA, Rhizoctonia solani AG-1IA, Rhizoctonia solani AG-1IA SC, Rhizoctonia solani AG1 IA, Rhizoctonia solani AG1 IA SC, Rhizoctonia solani AG1-IA
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