Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEH02088.1 | AEH02097.1 | Lacal_2243 | Lacal_2254 | KEGG: fjo:Fjoh_3266 hypothetical protein. | TIGRFAM: RHS repeat-associated core domain; YD repeat; KEGG: bfr:BF2847 putative rhs protein. | 0.751 |
AEH02088.1 | AEH02100.1 | Lacal_2243 | Lacal_2257 | KEGG: fjo:Fjoh_3266 hypothetical protein. | KEGG: bfr:BF2846 hypothetical protein. | 0.712 |
AEH02088.1 | AEH02101.1 | Lacal_2243 | Lacal_2258 | KEGG: fjo:Fjoh_3266 hypothetical protein. | KEGG: cpi:Cpin_6416 rhs element Vgr protein; TIGRFAM: Rhs element Vgr protein; PFAM: Rhs element Vgr protein. | 0.804 |
AEH02088.1 | AEH02102.1 | Lacal_2243 | Lacal_2259 | KEGG: fjo:Fjoh_3266 hypothetical protein. | KEGG: fjo:Fjoh_3261 hypothetical protein. | 0.857 |
AEH02088.1 | AEH02104.1 | Lacal_2243 | Lacal_2261 | KEGG: fjo:Fjoh_3266 hypothetical protein. | KEGG: cao:Celal_3745 hypothetical protein. | 0.821 |
AEH02088.1 | AEH02113.1 | Lacal_2243 | Lacal_2270 | KEGG: fjo:Fjoh_3266 hypothetical protein. | KEGG: cao:Celal_3988 rhs element vgr protein; TIGRFAM: Rhs element Vgr protein; PFAM: Rhs element Vgr protein. | 0.804 |
AEH02088.1 | AEH02115.1 | Lacal_2243 | Lacal_2272 | KEGG: fjo:Fjoh_3266 hypothetical protein. | KEGG: fjo:Fjoh_3278 hypothetical protein. | 0.783 |
AEH02088.1 | AEH02117.1 | Lacal_2243 | Lacal_2274 | KEGG: fjo:Fjoh_3266 hypothetical protein. | KEGG: fjo:Fjoh_3263 gpW/GP25 family protein. | 0.785 |
AEH02088.1 | AEH02118.1 | Lacal_2243 | Lacal_2275 | KEGG: fjo:Fjoh_3266 hypothetical protein. | KEGG: cpi:Cpin_2305 hypothetical protein. | 0.784 |
AEH02088.1 | AEH02120.1 | Lacal_2243 | Lacal_2277 | KEGG: fjo:Fjoh_3266 hypothetical protein. | KEGG: cpi:Cpin_2310 hypothetical protein. | 0.783 |
AEH02097.1 | AEH02088.1 | Lacal_2254 | Lacal_2243 | TIGRFAM: RHS repeat-associated core domain; YD repeat; KEGG: bfr:BF2847 putative rhs protein. | KEGG: fjo:Fjoh_3266 hypothetical protein. | 0.751 |
AEH02097.1 | AEH02100.1 | Lacal_2254 | Lacal_2257 | TIGRFAM: RHS repeat-associated core domain; YD repeat; KEGG: bfr:BF2847 putative rhs protein. | KEGG: bfr:BF2846 hypothetical protein. | 0.916 |
AEH02097.1 | AEH02101.1 | Lacal_2254 | Lacal_2258 | TIGRFAM: RHS repeat-associated core domain; YD repeat; KEGG: bfr:BF2847 putative rhs protein. | KEGG: cpi:Cpin_6416 rhs element Vgr protein; TIGRFAM: Rhs element Vgr protein; PFAM: Rhs element Vgr protein. | 0.915 |
AEH02097.1 | AEH02102.1 | Lacal_2254 | Lacal_2259 | TIGRFAM: RHS repeat-associated core domain; YD repeat; KEGG: bfr:BF2847 putative rhs protein. | KEGG: fjo:Fjoh_3261 hypothetical protein. | 0.886 |
AEH02097.1 | AEH02104.1 | Lacal_2254 | Lacal_2261 | TIGRFAM: RHS repeat-associated core domain; YD repeat; KEGG: bfr:BF2847 putative rhs protein. | KEGG: cao:Celal_3745 hypothetical protein. | 0.805 |
AEH02097.1 | AEH02113.1 | Lacal_2254 | Lacal_2270 | TIGRFAM: RHS repeat-associated core domain; YD repeat; KEGG: bfr:BF2847 putative rhs protein. | KEGG: cao:Celal_3988 rhs element vgr protein; TIGRFAM: Rhs element Vgr protein; PFAM: Rhs element Vgr protein. | 0.774 |
AEH02097.1 | AEH02115.1 | Lacal_2254 | Lacal_2272 | TIGRFAM: RHS repeat-associated core domain; YD repeat; KEGG: bfr:BF2847 putative rhs protein. | KEGG: fjo:Fjoh_3278 hypothetical protein. | 0.758 |
AEH02097.1 | AEH02117.1 | Lacal_2254 | Lacal_2274 | TIGRFAM: RHS repeat-associated core domain; YD repeat; KEGG: bfr:BF2847 putative rhs protein. | KEGG: fjo:Fjoh_3263 gpW/GP25 family protein. | 0.739 |
AEH02097.1 | AEH02118.1 | Lacal_2254 | Lacal_2275 | TIGRFAM: RHS repeat-associated core domain; YD repeat; KEGG: bfr:BF2847 putative rhs protein. | KEGG: cpi:Cpin_2305 hypothetical protein. | 0.775 |
AEH02097.1 | AEH02120.1 | Lacal_2254 | Lacal_2277 | TIGRFAM: RHS repeat-associated core domain; YD repeat; KEGG: bfr:BF2847 putative rhs protein. | KEGG: cpi:Cpin_2310 hypothetical protein. | 0.775 |
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