STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH02119.1KEGG: fjo:Fjoh_3280 PKD domain-containing protein; PFAM: PKD; SMART: PKD. (331 aa)    
Predicted Functional Partners:
AEH02120.1
KEGG: cpi:Cpin_2310 hypothetical protein.
 
     0.952
AEH02121.1
KEGG: cao:Celal_3743 hypothetical protein.
 
     0.937
AEH02118.1
KEGG: cpi:Cpin_2305 hypothetical protein.
 
     0.922
AEH02117.1
KEGG: fjo:Fjoh_3263 gpW/GP25 family protein.
 
     0.921
AEH02115.1
KEGG: fjo:Fjoh_3278 hypothetical protein.
 
     0.868
AEH02114.1
KEGG: cao:Celal_3749 hypothetical protein.
 
     0.844
AEH02113.1
KEGG: cao:Celal_3988 rhs element vgr protein; TIGRFAM: Rhs element Vgr protein; PFAM: Rhs element Vgr protein.
 
     0.816
AEH02104.1
KEGG: cao:Celal_3745 hypothetical protein.
 
     0.785
AEH02087.1
KEGG: fjo:Fjoh_3267 hypothetical protein.
 
     0.783
AEH02088.1
KEGG: fjo:Fjoh_3266 hypothetical protein.
 
     0.782
Your Current Organism:
Lacinutrix sp. 5H374
NCBI taxonomy Id: 983544
Other names: L. sp. 5H-3-7-4, Lacinutrix sp. 5H-3-7-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.