STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RGE_30310Hypothetical protein. (439 aa)    
Predicted Functional Partners:
RGE_30300
Hypothetical protein.
 
  
 0.973
RGE_30340
Hypothetical protein.
 
  
 0.968
RGE_30290
Hypothetical protein.
 
  
 0.965
RGE_30320
Hypothetical protein.
 
  
 0.965
RGE_30380
Hypothetical protein.
 
 
 0.964
RGE_25760
Hypothetical protein.
 
  
 0.944
RGE_25720
Hypothetical protein.
 
 
 0.939
RGE_30350
Hypothetical protein.
 
  
 0.935
RGE_30360
Hypothetical protein.
 
  
 0.921
RGE_30390
Hypothetical protein.
 
  
 0.918
Your Current Organism:
Rubrivivax gelatinosus
NCBI taxonomy Id: 983917
Other names: R. gelatinosus IL144, Rubrivivax gelatinosus IL144, Rubrivivax gelatinosus str. IL144, Rubrivivax gelatinosus strain IL144
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.