STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pufBBeta subunit of light-harvesting 1 (B870) complex PufB; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. (48 aa)    
Predicted Functional Partners:
pufM
Photosynthesis reaction center complex, M subunit PufM; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis.
 
 0.999
pufL
Photosynthesis reaction center complex, L subunit PufL; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis.
 
 0.999
pufA
Alpha subunit of light-harvesting 1 (B870) complex PufA; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.
 
 0.999
pufC
Photosynthesis reaction center complex, subunit C PufC; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor.
 
 
 0.995
puhA
H subunit of photosynthetic reaction center PuhA.
  
 
 0.992
bchY
Bacteriochlorophyllide reductase subunit Y BchY.
 
  
 0.969
bchZ
Bacteriochlorophyllide reductase subunit BchZ; Converts chlorophylls (Chl) into bacteriochlorophylls (BChl) by reducing ring B of the tetrapyrrole; Belongs to the ChlB/BchB/BchZ family.
 
   
 0.965
bchC
2-alpha-hydroxy ethyl bacteriochlorophyllide oxidase BchC.
 
   
 0.963
RGE_33650
Antenna complex, beta subunit family protein; Previously called ORF2 of Rubrivivax gelatinosus puf operon; protein synonym:ORF74.
    
  0.960
bchX
Bacteriochlorophyllide reductase subunit X BchX; Belongs to the NifH/BchL/ChlL family.
 
   
 0.945
Your Current Organism:
Rubrivivax gelatinosus
NCBI taxonomy Id: 983917
Other names: R. gelatinosus IL144, Rubrivivax gelatinosus IL144, Rubrivivax gelatinosus str. IL144, Rubrivivax gelatinosus strain IL144
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.