STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tet(38)Multidrug MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (451 aa)    
Predicted Functional Partners:
deoD
Purine-nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.887
API80090.1
Multidrug MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.760
API80262.1
Multidrug efflux protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.575
API78205.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.573
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
       0.570
deoB
Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.
       0.521
API78204.1
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.426
API80362.1
Chloramphenicol resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.413
Your Current Organism:
Staphylococcus argenteus
NCBI taxonomy Id: 985002
Other names: DSM 28299, NCTC 13711, S. argenteus, SSI 89.005, SSI:89.005, Staphylococcus argenteus Tong et al. 2015, Staphylococcus aureus clonal complex 75, Staphylococcus aureus subsp. aureus MSHR1132, strain MSHR1132
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