Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VMUT_0032 | VMUT_0605 | VMUT_0032 | VMUT_0605 | 2-ketoglutarate:ferredoxin oxidoreductase (KGOR), subunit beta. | Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (GAPN); Belongs to the aldehyde dehydrogenase family. | 0.823 |
VMUT_0032 | VMUT_0737 | VMUT_0032 | VMUT_0737 | 2-ketoglutarate:ferredoxin oxidoreductase (KGOR), subunit beta. | Bifunctional phosphoglucose/phosphomannose isomerase. | 0.843 |
VMUT_0032 | VMUT_1565 | VMUT_0032 | VMUT_1565 | 2-ketoglutarate:ferredoxin oxidoreductase (KGOR), subunit beta. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.924 |
VMUT_0032 | gdh1 | VMUT_0032 | VMUT_0441 | 2-ketoglutarate:ferredoxin oxidoreductase (KGOR), subunit beta. | Glucose dehydrogenase (GDH); Catalyzes the NAD(P)(+)-dependent oxidation of D-glucose to D-gluconate via gluconolactone. Can utilize both NAD(+) and NADP(+) as electron acceptor. Is involved in the degradation of glucose through a non-phosphorylative variant of the Entner-Doudoroff pathway. Belongs to the zinc-containing alcohol dehydrogenase family. Glucose 1-dehydrogenase subfamily. | 0.833 |
VMUT_0032 | gdh2 | VMUT_0032 | VMUT_1235 | 2-ketoglutarate:ferredoxin oxidoreductase (KGOR), subunit beta. | Glucose dehydrogenase (GDH); Catalyzes the NAD(P)(+)-dependent oxidation of D-glucose to D-gluconate via gluconolactone. Can utilize both NAD(+) and NADP(+) as electron acceptor. Is involved in the degradation of glucose through a non-phosphorylative variant of the Entner-Doudoroff pathway. Belongs to the zinc-containing alcohol dehydrogenase family. Glucose 1-dehydrogenase subfamily. | 0.833 |
VMUT_0590 | VMUT_0605 | VMUT_0590 | VMUT_0605 | Hexokinase. | Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (GAPN); Belongs to the aldehyde dehydrogenase family. | 0.852 |
VMUT_0590 | VMUT_0737 | VMUT_0590 | VMUT_0737 | Hexokinase. | Bifunctional phosphoglucose/phosphomannose isomerase. | 0.962 |
VMUT_0590 | VMUT_1314 | VMUT_0590 | VMUT_1314 | Hexokinase. | Phosphoglycerate mutase. | 0.449 |
VMUT_0590 | VMUT_1565 | VMUT_0590 | VMUT_1565 | Hexokinase. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.432 |
VMUT_0590 | eno | VMUT_0590 | VMUT_1581 | Hexokinase. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.609 |
VMUT_0590 | gap | VMUT_0590 | VMUT_0389 | Hexokinase. | Glyceraldehyde-3-phosphate dehydrogenase, type II. | 0.586 |
VMUT_0590 | gdh1 | VMUT_0590 | VMUT_0441 | Hexokinase. | Glucose dehydrogenase (GDH); Catalyzes the NAD(P)(+)-dependent oxidation of D-glucose to D-gluconate via gluconolactone. Can utilize both NAD(+) and NADP(+) as electron acceptor. Is involved in the degradation of glucose through a non-phosphorylative variant of the Entner-Doudoroff pathway. Belongs to the zinc-containing alcohol dehydrogenase family. Glucose 1-dehydrogenase subfamily. | 0.875 |
VMUT_0590 | gdh2 | VMUT_0590 | VMUT_1235 | Hexokinase. | Glucose dehydrogenase (GDH); Catalyzes the NAD(P)(+)-dependent oxidation of D-glucose to D-gluconate via gluconolactone. Can utilize both NAD(+) and NADP(+) as electron acceptor. Is involved in the degradation of glucose through a non-phosphorylative variant of the Entner-Doudoroff pathway. Belongs to the zinc-containing alcohol dehydrogenase family. Glucose 1-dehydrogenase subfamily. | 0.880 |
VMUT_0590 | tpiA | VMUT_0590 | VMUT_2092 | Hexokinase. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.630 |
VMUT_0605 | VMUT_0032 | VMUT_0605 | VMUT_0032 | Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (GAPN); Belongs to the aldehyde dehydrogenase family. | 2-ketoglutarate:ferredoxin oxidoreductase (KGOR), subunit beta. | 0.823 |
VMUT_0605 | VMUT_0590 | VMUT_0605 | VMUT_0590 | Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (GAPN); Belongs to the aldehyde dehydrogenase family. | Hexokinase. | 0.852 |
VMUT_0605 | VMUT_0737 | VMUT_0605 | VMUT_0737 | Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (GAPN); Belongs to the aldehyde dehydrogenase family. | Bifunctional phosphoglucose/phosphomannose isomerase. | 0.871 |
VMUT_0605 | VMUT_1314 | VMUT_0605 | VMUT_1314 | Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (GAPN); Belongs to the aldehyde dehydrogenase family. | Phosphoglycerate mutase. | 0.918 |
VMUT_0605 | VMUT_1565 | VMUT_0605 | VMUT_1565 | Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (GAPN); Belongs to the aldehyde dehydrogenase family. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.856 |
VMUT_0605 | eno | VMUT_0605 | VMUT_1581 | Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (GAPN); Belongs to the aldehyde dehydrogenase family. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.870 |
page 1 of 5