STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tglTransglutaminase. (238 aa)    
Predicted Functional Partners:
AET61121.1
AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.697
AET59133.1
Small acid-soluble spore protein tlp.
  
     0.586
AET57091.1
Hypothetical protein.
  
     0.563
AET61783.1
COG3037 Uncharacterized protein conserved in bacteria.
  
     0.544
AET60670.1
FhuF/siderophore biosynthesis protein; COG4114 Uncharacterized Fe-S protein.
  
     0.543
AET57480.1
Small acid-soluble spore protein.
  
     0.537
AET60879.1
COG3773 Cell wall hydrolyses involved in spore germination.
  
   
 0.519
AET61448.1
Hypothetical protein.
  
     0.501
AET58579.1
Spore germination protein (amino acid permease).
  
     0.500
AET58314.1
Hypothetical protein.
  
     0.498
Your Current Organism:
Paenibacillus terrae
NCBI taxonomy Id: 985665
Other names: P. terrae HPL-003, Paenibacillus sp. HPL-003, Paenibacillus terrae HPL-003, Paenibacillus terrae str. HPL-003, Paenibacillus terrae strain HPL-003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.