STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO96436.1Spermidine/putrescine-binding protein periplasmic protein; TC 3.A.1.11.1. (382 aa)    
Predicted Functional Partners:
AKO96437.1
ABC-type spermidine/putrescine transport system, permease component II; TC_3.A.1.11.1.
 
 
 0.995
AKO96438.1
ABC-type spermidine/putrescine transport system, permease component I; TC 3.A.1.11.1.
 
 
 0.995
potA
Spermidine/putrescine ABC transporter ATP-binding protein subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 0.968
AKO96439.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.873
AKO96434.1
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
    0.852
AKO96432.1
Deacetylase; Including yeast histone deacetylase and acetoin utilization protein.
 
    0.769
AKO98414.1
ABC-type spermidine/putrescine transport system, permease component I.
 
 
 0.762
AKO98428.1
Putrescine transport system permease protein PotI; TC 3.A.1.11.2.
  
 
 0.754
AKO98427.1
Putrescine transport system permease protein PotH; TC 3.A.1.11.2.
  
 
 0.722
AKO98413.1
ABC-type spermidine/putrescine transport system, permease component II.
  
 
 0.694
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.