STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO97023.1Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family. (468 aa)    
Predicted Functional Partners:
AKO97022.1
Cyclopropane fatty acid synthase; And related methyltransferases.
 
   
 0.852
AKO97021.1
Tellurite resistance protein TrgA.
       0.745
AKO98247.1
Putative NAD/FAD-binding protein.
 
   
 0.739
AKO97048.1
Secreted and surface protein; Containing fasciclin-like repeats.
 
  
 0.640
AKO96494.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
   0.600
AKO97020.1
Tellurite resistance protein TrgB / ADP-ribose pyrophosphatase.
       0.598
AKO98246.1
Hypothetical protein.
 
    0.577
AKO97019.1
Cysteine synthase.
   
   0.576
AKO98249.1
Anti-sigma factor, putative, ChrR family.
 
   
 0.570
ybeY
Metalloprotein, YbeY family; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
    
   0.543
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.