STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO97033.1TRAP transporter solute receptor, TAXI family. (319 aa)    
Predicted Functional Partners:
AKO97035.1
TRAP transporter, 4TM/12TM fusion protein.
    0.994
AKO97034.1
Domain protein of unknown function; DUF1850.
  
    0.797
AKO97036.1
DNA repair exonuclease.
       0.549
AKO97037.1
Hypothetical protein.
       0.543
AKO97029.1
Acyl-CoA synthetase (NDP forming).
       0.442
AKO97031.1
Hypothetical protein.
       0.440
lcdH
3-hydroxyacyl-CoA dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine.
       0.433
AKO97028.1
Acyl-CoA dehydrogenase.
     
 0.432
AKO97030.1
Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.419
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.