STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKO98650.1Hypothetical protein. (516 aa)    
Predicted Functional Partners:
AKO97768.1
Signal transduction histidine kinase.
 
 
 0.904
AKO98654.1
Double-strand break repair protein AddB, alphaproteobacterial type.
 
     0.864
AKO96948.1
Hypothetical protein.
  
    0.855
AKO98752.1
Flagellar basal-body M-ring protein/flagellar hook-basal body protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
  
  
 0.830
AKO97574.1
Flagellar motor switch protein.
 
  
 0.824
AKO97334.1
Glycosyltransferase, probably involved in cell wall biogenesis.
 
  
 0.810
AKO98649.1
Signal transduction histidine kinase.
   
 
 0.780
AKO98117.1
Signal transduction histidine kinase.
 
 
 0.771
AKO98653.1
Nucleoside-diphosphate-sugar pyrophosphorylase; eIF-2Bgamma/eIF-2Bepsilon; involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunit.
     
 0.764
AKO98651.1
ATPase, YjeE family.
       0.757
Your Current Organism:
Marinovum algicola
NCBI taxonomy Id: 988812
Other names: M. algicola DG 898, Marinovum algicola DG 898, Marinovum algicola str. DG 898, Marinovum algicola strain DG 898
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.