STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCON_0694Cation diffusion facilitator family transporter. (395 aa)    
Predicted Functional Partners:
MCON_0692
Zinc/iron ZIP family permease.
 
  
 0.695
MCON_0698
Iron sulfur cluster/nucleotide binding domain protein.
      0.636
MCON_0696
Dinitrogenase iron-molybdenum cofactor biosynthesis protein.
 
     0.594
MCON_0693
Conserved hypothetical protein.
       0.577
MCON_0697
Iron sulfur cluster/nucleotide binding domain protein.
      0.563
MCON_0695
Dinitrogenase iron-molybdenum cofactor biosynthesis protein.
       0.539
MCON_0306
Cation diffusion facilitator family transporter.
 
 
 0.524
nadE
Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
   0.508
MCON_0290
Peptidase M50, putative; Protein involved in integral to plasma membrane.
  
  
 0.505
MCON_3047
Cytochrome c biogenesis protein, transmembrane region.
     
 0.448
Your Current Organism:
Methanothrix soehngenii
NCBI taxonomy Id: 990316
Other names: M. soehngenii GP6, Methanosaeta concilii DSM 3671, Methanosaeta concilii GP6, Methanothrix soehngenii DSM 3671, Methanothrix soehngenii GP6
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