STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCON_2134Response regulator receiver domain protein. (134 aa)    
Predicted Functional Partners:
MCON_3220
Histidine-protein kinase.
 
 
0.793
MCON_0973
Stage II sporulation SpoIIE family protein.
 
  
 0.608
MCON_1876
Response regulator receiver protein.
 
     0.574
MCON_1639
Multi-sensor hybrid histidine kinase.
 
 
 
0.531
MCON_1506
Response regulator domain with PAS sensor, putative; Protein involved in signal transducer activity and signal transduction.
 
     0.499
MCON_2375
Two-component hybrid sensor and regulator.
 
 
 
0.492
MCON_2222
Two-component hybrid sensor and regulator.
 
 
 
0.486
MCON_0358
Cache, type 2 domain protein.
  
 
 0.482
MCON_3087
Cache domain protein.
  
 
 0.482
MCON_2133
Conserved hypothetical protein.
       0.474
Your Current Organism:
Methanothrix soehngenii
NCBI taxonomy Id: 990316
Other names: M. soehngenii GP6, Methanosaeta concilii DSM 3671, Methanosaeta concilii GP6, Methanothrix soehngenii DSM 3671, Methanothrix soehngenii GP6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.