STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCON_3436Conserved hypothetical protein TIGR00104. (152 aa)    
Predicted Functional Partners:
fwdE-2
Tungsten formylmethanofuran dehydrogenase, subunit E.
     0.798
MCON_3432
Conserved hypothetical protein.
       0.617
MCON_3433
Oligopeptide/dipeptide ABC transporter, ATP-binding protein.
       0.586
MCON_3435
Oligopeptide/dipeptide ABC transporter, permease protein.
       0.586
MCON_3434
Oligopeptide/dipeptide ABC transporter, permease protein.
       0.585
fwdE
Tungsten formylmethanofuran dehydrogenase, subunit E.
     0.497
MCON_3438
Extracellular solute-binding protein, family 5.
       0.441
Your Current Organism:
Methanothrix soehngenii
NCBI taxonomy Id: 990316
Other names: M. soehngenii GP6, Methanosaeta concilii DSM 3671, Methanosaeta concilii GP6, Methanothrix soehngenii DSM 3671, Methanothrix soehngenii GP6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.