STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK55623.1Monothiol glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily. (119 aa)    
Predicted Functional Partners:
SDK55654.1
Stress-induced morphogen (activity unknown); Belongs to the BolA/IbaG family.
 
 
 0.990
SDK56010.1
BolA protein; Belongs to the BolA/IbaG family.
  
 
 0.908
SDK86613.1
Iron-sulfur cluster assembly protein; Belongs to the HesB/IscA family.
 
 0.882
SDK40224.1
Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family.
 
 0.866
SDJ95512.1
Glutaredoxin 3; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.
 
 
 0.826
SDK93351.1
DnaJ like chaperone protein.
     
 0.746
SDK34603.1
Hypothetical protein; Belongs to the GcvT family.
  
   
 0.635
map
Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
 
  
 0.630
thrS
threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).
  
 
 0.630
SDK08415.1
Fe-S cluster biogenesis protein NfuA, 4Fe-4S-binding domain.
  
 
 0.577
Your Current Organism:
Albidovulum xiamenense
NCBI taxonomy Id: 990712
Other names: A. xiamenense, Albidovulum sp. YBY-7, Albidovulum xiamenense Yin et al. 2012, CGMCC 1.10789, LMG 26247, LMG:26247, MCCC 1A06317, strain YBY-7
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