Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FOXA2 | FOXG1 | ENSBTAP00000016463 | ENSBTAP00000068470 | Forkhead box A2. | Forkhead box G1. | 0.430 |
FOXA2 | GFAP | ENSBTAP00000016463 | ENSBTAP00000073843 | Forkhead box A2. | Glial fibrillary acidic protein; GFAP, a class-III intermediate filament, is a cell-specific marker that, during the development of the central nervous system, distinguishes astrocytes from other glial cells. | 0.447 |
FOXA2 | ISL1 | ENSBTAP00000016463 | ENSBTAP00000001638 | Forkhead box A2. | ISL LIM homeobox 1. | 0.694 |
FOXA2 | NANOG | ENSBTAP00000016463 | ENSBTAP00000027863 | Forkhead box A2. | Homeobox protein NANOG; Transcription regulator involved in inner cell mass and embryonic stem (ES) cells proliferation and self-renewal. Imposes pluripotency on ES cells and prevents their differentiation towards extraembryonic endoderm and trophectoderm lineages. Blocks bone morphogenetic protein-induced mesoderm differentiation of ES cells by physically interacting with SMAD1 and interfering with the recruitment of coactivators to the active SMAD transcriptional complexes. Acts as a transcriptional activator and repressor. Binds optimally to the DNA consensus sequence 5'-TAAT[GT][GT [...] | 0.891 |
FOXA2 | NES | ENSBTAP00000016463 | ENSBTAP00000020974 | Forkhead box A2. | Nestin; Belongs to the intermediate filament family. | 0.717 |
FOXA2 | OLIG2 | ENSBTAP00000016463 | ENSBTAP00000061627 | Forkhead box A2. | Oligodendrocyte transcription factor 2. | 0.546 |
FOXA2 | PAX6 | ENSBTAP00000016463 | ENSBTAP00000063429 | Forkhead box A2. | Paired box protein Pax-6; Transcription factor with important functions in the development of the eye, nose, central nervous system and pancreas. Required for the differentiation of pancreatic islet alpha cells. Competes with PAX4 in binding to a common element in the glucagon, insulin and somatostatin promoters. Regulates specification of the ventral neuron subtypes by establishing the correct progenitor domains (By similarity); Belongs to the paired homeobox family. | 0.896 |
FOXA2 | SOX17 | ENSBTAP00000016463 | ENSBTAP00000007553 | Forkhead box A2. | SRY-box 17. | 0.904 |
FOXG1 | FOXA2 | ENSBTAP00000068470 | ENSBTAP00000016463 | Forkhead box G1. | Forkhead box A2. | 0.430 |
FOXG1 | GFAP | ENSBTAP00000068470 | ENSBTAP00000073843 | Forkhead box G1. | Glial fibrillary acidic protein; GFAP, a class-III intermediate filament, is a cell-specific marker that, during the development of the central nervous system, distinguishes astrocytes from other glial cells. | 0.613 |
FOXG1 | ISL1 | ENSBTAP00000068470 | ENSBTAP00000001638 | Forkhead box G1. | ISL LIM homeobox 1. | 0.489 |
FOXG1 | NANOG | ENSBTAP00000068470 | ENSBTAP00000027863 | Forkhead box G1. | Homeobox protein NANOG; Transcription regulator involved in inner cell mass and embryonic stem (ES) cells proliferation and self-renewal. Imposes pluripotency on ES cells and prevents their differentiation towards extraembryonic endoderm and trophectoderm lineages. Blocks bone morphogenetic protein-induced mesoderm differentiation of ES cells by physically interacting with SMAD1 and interfering with the recruitment of coactivators to the active SMAD transcriptional complexes. Acts as a transcriptional activator and repressor. Binds optimally to the DNA consensus sequence 5'-TAAT[GT][GT [...] | 0.483 |
FOXG1 | NES | ENSBTAP00000068470 | ENSBTAP00000020974 | Forkhead box G1. | Nestin; Belongs to the intermediate filament family. | 0.804 |
FOXG1 | OLIG2 | ENSBTAP00000068470 | ENSBTAP00000061627 | Forkhead box G1. | Oligodendrocyte transcription factor 2. | 0.589 |
FOXG1 | PAX6 | ENSBTAP00000068470 | ENSBTAP00000063429 | Forkhead box G1. | Paired box protein Pax-6; Transcription factor with important functions in the development of the eye, nose, central nervous system and pancreas. Required for the differentiation of pancreatic islet alpha cells. Competes with PAX4 in binding to a common element in the glucagon, insulin and somatostatin promoters. Regulates specification of the ventral neuron subtypes by establishing the correct progenitor domains (By similarity); Belongs to the paired homeobox family. | 0.900 |
FOXG1 | SATB2 | ENSBTAP00000068470 | ENSBTAP00000068350 | Forkhead box G1. | DNA-binding protein SATB. | 0.807 |
FOXG1 | SOX17 | ENSBTAP00000068470 | ENSBTAP00000007553 | Forkhead box G1. | SRY-box 17. | 0.421 |
FOXG1 | TBR1 | ENSBTAP00000068470 | ENSBTAP00000028908 | Forkhead box G1. | T-box brain transcription factor 1. | 0.892 |
GFAP | FOXA2 | ENSBTAP00000073843 | ENSBTAP00000016463 | Glial fibrillary acidic protein; GFAP, a class-III intermediate filament, is a cell-specific marker that, during the development of the central nervous system, distinguishes astrocytes from other glial cells. | Forkhead box A2. | 0.447 |
GFAP | FOXG1 | ENSBTAP00000073843 | ENSBTAP00000068470 | Glial fibrillary acidic protein; GFAP, a class-III intermediate filament, is a cell-specific marker that, during the development of the central nervous system, distinguishes astrocytes from other glial cells. | Forkhead box G1. | 0.613 |
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