Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BLM | EME1 | ENSBTAP00000027057 | ENSBTAP00000055580 | BLM RecQ like helicase. | Essential meiotic structure-specific endonuclease 1. | 0.648 |
BLM | ERCC1 | ENSBTAP00000027057 | ENSBTAP00000023078 | BLM RecQ like helicase. | DNA excision repair protein ERCC-1; Non-catalytic component of a structure-specific DNA repair endonuclease responsible for the 5'-incision during DNA repair. Responsible, in conjunction with SLX4, for the first step in the repair of interstrand cross-links (ICL). Participates in the processing of anaphase bridge-generating DNA structures, which consist in incompletely processed DNA lesions arising during S or G2 phase, and can result in cytokinesis failure. Also required for homology-directed repair (HDR) of DNA double-strand breaks, in conjunction with SLX4 (By similarity). | 0.628 |
BLM | ERCC4 | ENSBTAP00000027057 | ENSBTAP00000043645 | BLM RecQ like helicase. | ERCC excision repair 4, endonuclease catalytic subunit. | 0.851 |
BLM | EXO1 | ENSBTAP00000027057 | ENSBTAP00000012365 | BLM RecQ like helicase. | Exonuclease 1. | 0.989 |
BLM | GEN1 | ENSBTAP00000027057 | ENSBTAP00000041132 | BLM RecQ like helicase. | GEN1 Holliday junction 5' flap endonuclease. | 0.780 |
BLM | MUS81 | ENSBTAP00000027057 | ENSBTAP00000053117 | BLM RecQ like helicase. | MUS81 structure-specific endonuclease subunit. | 0.953 |
BLM | RMI1 | ENSBTAP00000027057 | ENSBTAP00000063708 | BLM RecQ like helicase. | RecQ-mediated genome instability protein 1; Essential component of the RMI complex, a complex that plays an important role in the processing of homologous recombination intermediates to limit DNA crossover formation in cells. Promotes TOP3A binding to double Holliday junctions (DHJ) and hence stimulates TOP3A- mediated dissolution. Required for BLM phosphorylation during mitosis. Within the BLM complex, required for BLM and TOP3A stability (By similarity). | 0.992 |
BLM | SLX1A | ENSBTAP00000027057 | ENSBTAP00000068428 | BLM RecQ like helicase. | Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. Has a preference for 5'-flap structures, and promotes symmetrical cleavage of static and migrating Holliday junctions (HJs). Resolves HJs by generating two pairs of ligatable, nicked duplex products. | 0.911 |
BLM | SLX4 | ENSBTAP00000027057 | ENSBTAP00000005923 | BLM RecQ like helicase. | SLX4 structure-specific endonuclease subunit. | 0.678 |
BLM | WRN | ENSBTAP00000027057 | ENSBTAP00000028778 | BLM RecQ like helicase. | WRN RecQ like helicase. | 0.704 |
EME1 | BLM | ENSBTAP00000055580 | ENSBTAP00000027057 | Essential meiotic structure-specific endonuclease 1. | BLM RecQ like helicase. | 0.648 |
EME1 | ERCC1 | ENSBTAP00000055580 | ENSBTAP00000023078 | Essential meiotic structure-specific endonuclease 1. | DNA excision repair protein ERCC-1; Non-catalytic component of a structure-specific DNA repair endonuclease responsible for the 5'-incision during DNA repair. Responsible, in conjunction with SLX4, for the first step in the repair of interstrand cross-links (ICL). Participates in the processing of anaphase bridge-generating DNA structures, which consist in incompletely processed DNA lesions arising during S or G2 phase, and can result in cytokinesis failure. Also required for homology-directed repair (HDR) of DNA double-strand breaks, in conjunction with SLX4 (By similarity). | 0.867 |
EME1 | ERCC4 | ENSBTAP00000055580 | ENSBTAP00000043645 | Essential meiotic structure-specific endonuclease 1. | ERCC excision repair 4, endonuclease catalytic subunit. | 0.792 |
EME1 | EXO1 | ENSBTAP00000055580 | ENSBTAP00000012365 | Essential meiotic structure-specific endonuclease 1. | Exonuclease 1. | 0.875 |
EME1 | GEN1 | ENSBTAP00000055580 | ENSBTAP00000041132 | Essential meiotic structure-specific endonuclease 1. | GEN1 Holliday junction 5' flap endonuclease. | 0.865 |
EME1 | MUS81 | ENSBTAP00000055580 | ENSBTAP00000053117 | Essential meiotic structure-specific endonuclease 1. | MUS81 structure-specific endonuclease subunit. | 0.999 |
EME1 | RMI1 | ENSBTAP00000055580 | ENSBTAP00000063708 | Essential meiotic structure-specific endonuclease 1. | RecQ-mediated genome instability protein 1; Essential component of the RMI complex, a complex that plays an important role in the processing of homologous recombination intermediates to limit DNA crossover formation in cells. Promotes TOP3A binding to double Holliday junctions (DHJ) and hence stimulates TOP3A- mediated dissolution. Required for BLM phosphorylation during mitosis. Within the BLM complex, required for BLM and TOP3A stability (By similarity). | 0.705 |
EME1 | SLX1A | ENSBTAP00000055580 | ENSBTAP00000068428 | Essential meiotic structure-specific endonuclease 1. | Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. Has a preference for 5'-flap structures, and promotes symmetrical cleavage of static and migrating Holliday junctions (HJs). Resolves HJs by generating two pairs of ligatable, nicked duplex products. | 0.918 |
EME1 | SLX4 | ENSBTAP00000055580 | ENSBTAP00000005923 | Essential meiotic structure-specific endonuclease 1. | SLX4 structure-specific endonuclease subunit. | 0.965 |
EME1 | WRN | ENSBTAP00000055580 | ENSBTAP00000028778 | Essential meiotic structure-specific endonuclease 1. | WRN RecQ like helicase. | 0.702 |
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