STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPRAReceptor-type tyrosine-protein phosphatase alpha. (813 aa)    
Predicted Functional Partners:
GRB2
Growth factor receptor-bound protein 2.
   
 0.927
ZFP37
ZFP37 zinc finger protein.
      
 0.861
PCED1A
PC-esterase domain containing 1A.
      
 0.792
UBOX5
U-box domain containing 5.
      
 0.773
RFTN1
Uncharacterized protein.
      
 0.685
ENSBTAP00000066030
Uncharacterized protein.
      
 0.669
POF1B
POF1B actin binding protein.
   
  
 0.652
RNF24
Ring finger protein 24.
   
 
 0.643
DOCK2
Dedicator of cytokinesis 2; Belongs to the DOCK family.
   
  
 0.638
CNTN5
Contactin 5.
    
 
 0.627
Your Current Organism:
Bos taurus
NCBI taxonomy Id: 9913
Other names: B. taurus, Bos bovis, Bos primigenius taurus, Bovidae sp. Adi Nefas, bovine, cattle, cow, dairy cow, domestic cattle, domestic cow
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